--- bezeichner: "io.github.mims-harvard/tooluniverse" art: "mcp_server" slug: "io-github-mims-harvard-tooluniverse" paketkoordinate: "pypi:tooluniverse" status: "aktiv" homepage: "https://aiscientist.tools" erhebungsstand: "2026-10-11T01:17:01.851Z" namensraum: "io.github.mims-harvard" registerseite: "https://tracevero.com/mcp/io-github-mims-harvard-tooluniverse" abgerufen_am: "2026-10-11" zugangsdaten_erforderlich: false ausfuehrungsort: "lokal" dateisystem_pfadargument: false quelloffen_einsehbar: true roh_beschreibung: "2,700+ scientific tools for AI scientists: life science, research, literature, and more." version: "1.5.6" roh_umgebungsvariablen: "OPENAI_API_KEY, ANTHROPIC_API_KEY, GEMINI_API_KEY, OPENROUTER_API_KEY, AZURE_OPENAI_API_KEY, HF_TOKEN, NCBI_API_KEY, SEMANTIC_SCHOLAR_API_KEY, BIOGRID_API_KEY, DISGENET_API_KEY, OMIM_API_KEY, ONCOKB_API_TOKEN, NVIDIA_API_KEY, USPTO_API_KEY, UMLS_API_KEY, BRENDA_EMAIL, BRENDA_PASSWORD" roh_geheime_pflichtvariablen: "" roh_transportarten: "stdio" roh_pfadargumente: "" roh_repository_url: "https://github.com/mims-harvard/ToolUniverse" roh_paketquellen: "pypi" roh_geheime_pflichtkopfzeilen: "" roh_pfad_umgebungsvariablen: "" roh_remote_adressen: "" roh_remote_hosts: "" roh_statusmeldung: "" roh_veroeffentlicht_am: "2026-10-06" roh_aktualisiert_am: "2026-10-06" roh_schemafassung: "https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json" roh_bereitstellungsform: "paket" roh_repository_quelle: "github" roh_repository_unterordner: "" roh_paketbezeichner: "tooluniverse" roh_paketversionen: "1.5.6" roh_laufzeithinweise: "uvx" roh_umgebungsformate: "" roh_umgebungsbeschreibungen: "ANTHROPIC_API_KEY=Anthropic API key for Claude-based features · AZURE_OPENAI_API_KEY=Azure OpenAI API key (alternative to OpenAI) · BIOGRID_API_KEY=BioGRID API key for protein-protein interaction queries. Register free at https://webservice.thebiogrid.org/ · BRENDA_EMAIL=BRENDA enzyme database login email. Register at https://www.brenda-enzymes.org/ · BRENDA_PASSWORD=BRENDA enzyme database login password · DISGENET_API_KEY=DisGeNET API key for gene-disease association data. Register free at https://www.disgenet.org/ · GEMINI_API_KEY=Google Gemini API key for Gemini-based features · HF_TOKEN=HuggingFace token for accessing models and datasets · NCBI_API_KEY=NCBI/PubMed API key for higher rate limits (10 req/sec vs 3 req/sec). Register at https://www.ncbi.nlm.nih.gov/account/ · NVIDIA_API_KEY=NVIDIA NIM API key for AlphaFold2 structure prediction, molecular docking, and genomics tools. Get key at https://build.nvidia.com · OMIM_API_KEY=OMIM API key for Mendelian disease data. Register at https://omim.org/api · ONCOKB_API_TOKEN=OncoKB API token for precision oncology annotations. Register at https://www.oncokb.org/apiAccess · OPENAI_API_KEY=OpenAI API key for LLM-based tool finding and embedding features · OPENROUTER_API_KEY=OpenRouter API key for accessing 100+ LLM models · SEMANTIC_SCHOLAR_API_KEY=Semantic Scholar API key for higher rate limits (100 req/sec vs 1 req/sec). Register at https://www.semanticscholar.org/product/api · UMLS_API_KEY=UMLS API key for medical terminology and concept mapping. Register at https://uts.nlm.nih.gov/uts/ · USPTO_API_KEY=USPTO API key for patent data access. Register at https://developer.uspto.gov/" roh_symbolformate: "" roh_verbindungswege: "{\"packages\":[{\"registryType\":\"pypi\",\"identifier\":\"tooluniverse\",\"version\":\"1.5.6\",\"runtimeHint\":\"uvx\",\"transport\":\"stdio\",\"environment\":[{\"name\":\"OPENAI_API_KEY\",\"description\":\"OpenAI API key for LLM-based tool finding and embedding features\",\"required\":false,\"secret\":true},{\"name\":\"ANTHROPIC_API_KEY\",\"description\":\"Anthropic API key for Claude-based features\",\"required\":false,\"secret\":true},{\"name\":\"GEMINI_API_KEY\",\"description\":\"Google Gemini API key for Gemini-based features\",\"required\":false,\"secret\":true},{\"name\":\"OPENROUTER_API_KEY\",\"description\":\"OpenRouter API key for accessing 100+ LLM models\",\"required\":false,\"secret\":true},{\"name\":\"AZURE_OPENAI_API_KEY\",\"description\":\"Azure OpenAI API key (alternative to OpenAI)\",\"required\":false,\"secret\":true},{\"name\":\"HF_TOKEN\",\"description\":\"HuggingFace token for accessing models and datasets\",\"required\":false,\"secret\":true},{\"name\":\"NCBI_API_KEY\",\"description\":\"NCBI/PubMed API key for higher rate limits (10 req/sec vs 3 req/sec). Register at https://www.ncbi.nlm.nih.gov/account/\",\"required\":false,\"secret\":true},{\"name\":\"SEMANTIC_SCHOLAR_API_KEY\",\"description\":\"Semantic Scholar API key for higher rate limits (100 req/sec vs 1 req/sec). Register at https://www.semanticscholar.org/product/api\",\"required\":false,\"secret\":true},{\"name\":\"BIOGRID_API_KEY\",\"description\":\"BioGRID API key for protein-protein interaction queries. Register free at https://webservice.thebiogrid.org/\",\"required\":false,\"secret\":true},{\"name\":\"DISGENET_API_KEY\",\"description\":\"DisGeNET API key for gene-disease association data. Register free at https://www.disgenet.org/\",\"required\":false,\"secret\":true},{\"name\":\"OMIM_API_KEY\",\"description\":\"OMIM API key for Mendelian disease data. Register at https://omim.org/api\",\"required\":false,\"secret\":true},{\"name\":\"ONCOKB_API_TOKEN\",\"description\":\"OncoKB API token for precision oncology annotations. Register at https://www.oncokb.org/apiAccess\",\"required\":false,\"secret\":true},{\"name\":\"NVIDIA_API_KEY\",\"description\":\"NVIDIA NIM API key for AlphaFold2 structure prediction, molecular docking, and genomics tools. Get key at https://build.nvidia.com\",\"required\":false,\"secret\":true},{\"name\":\"USPTO_API_KEY\",\"description\":\"USPTO API key for patent data access. Register at https://developer.uspto.gov/\",\"required\":false,\"secret\":true},{\"name\":\"UMLS_API_KEY\",\"description\":\"UMLS API key for medical terminology and concept mapping. Register at https://uts.nlm.nih.gov/uts/\",\"required\":false,\"secret\":true},{\"name\":\"BRENDA_EMAIL\",\"description\":\"BRENDA enzyme database login email. Register at https://www.brenda-enzymes.org/\",\"required\":false,\"secret\":false},{\"name\":\"BRENDA_PASSWORD\",\"description\":\"BRENDA enzyme database login password\",\"required\":false,\"secret\":true}],\"additional_arguments_declared\":true}],\"remotes\":[]}" --- # io.github.mims-harvard/tooluniverse ## Measured values | Property | Value | Source | Collected on | Level of trust | Raw declaration | | --- | --- | --- | --- | --- | --- | | Required secrets declared | false | MCP-Register | 2026-08-06T13:57:41.838Z | abgeleitet | roh_geheime_pflichtvariablen: ; roh_geheime_pflichtkopfzeilen: | | Execution location | lokal | MCP-Register | 2026-08-06T13:57:41.838Z | abgeleitet | roh_transportarten: stdio | | Path argument present | false | MCP-Register | 2026-08-06T13:57:41.838Z | abgeleitet | roh_pfadargumente: ; roh_pfad_umgebungsvariablen: | | Repository URL listed | true | MCP-Register | 2026-08-06T13:57:41.838Z | abgeleitet | roh_repository_url: https://github.com/mims-harvard/ToolUniverse | | Description (raw) | 2,700+ scientific tools for AI scientists: life science, research, literature, and more. | MCP-Register | 2026-10-06T01:17:01.689Z | selbstauskunft | | | Declared version | 1.5.6 | MCP-Register | 2026-10-07T01:17:01.897Z | selbstauskunft | | | Environment variables (raw) | OPENAI_API_KEY, ANTHROPIC_API_KEY, GEMINI_API_KEY, OPENROUTER_API_KEY, AZURE_OPENAI_API_KEY, HF_TOKEN, NCBI_API_KEY, SEMANTIC_SCHOLAR_API_KEY, BIOGRID_API_KEY, DISGENET_API_KEY, OMIM_API_KEY, ONCOKB_API_TOKEN, NVIDIA_API_KEY, USPTO_API_KEY, UMLS_API_KEY, BRENDA_EMAIL, BRENDA_PASSWORD | MCP-Register | 2026-08-06T13:57:41.838Z | selbstauskunft | | | Required secret variables (raw) | | MCP-Register | 2026-08-06T13:57:41.838Z | selbstauskunft | | | Transports (raw) | stdio | MCP-Register | 2026-08-06T13:57:41.838Z | selbstauskunft | | | Path arguments (raw) | | MCP-Register | 2026-08-06T13:57:41.838Z | selbstauskunft | | | Repository (raw) | https://github.com/mims-harvard/ToolUniverse | MCP-Register | 2026-08-06T13:57:41.838Z | selbstauskunft | | | Package registries (raw) | pypi | MCP-Register | 2026-08-06T13:57:41.838Z | selbstauskunft | | | Required secret headers (raw) | | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Path environment variables (raw) | | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Remote URLs (raw) | | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Remote hosts (raw) | | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Registry status message (raw) | | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | First listed in the registry (raw) | 2026-10-06 | MCP-Register | 2026-10-07T01:17:01.897Z | selbstauskunft | | | Last changed in the registry (raw) | 2026-10-06 | MCP-Register | 2026-10-07T01:17:01.897Z | selbstauskunft | | | Schema version of the raw record (raw) | https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Delivery form (raw) | paket | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Repository platform (raw) | github | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Repository subfolder (raw) | | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Package identifiers (raw) | tooluniverse | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Package versions (raw) | 1.5.6 | MCP-Register | 2026-10-07T01:17:01.897Z | selbstauskunft | | | Runtime hints (raw) | uvx | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Environment variable formats (raw) | | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Environment variable descriptions (raw) | ANTHROPIC_API_KEY=Anthropic API key for Claude-based features · AZURE_OPENAI_API_KEY=Azure OpenAI API key (alternative to OpenAI) · BIOGRID_API_KEY=BioGRID API key for protein-protein interaction queries. Register free at https://webservice.thebiogrid.org/ · BRENDA_EMAIL=BRENDA enzyme database login email. Register at https://www.brenda-enzymes.org/ · BRENDA_PASSWORD=BRENDA enzyme database login password · DISGENET_API_KEY=DisGeNET API key for gene-disease association data. Register free at https://www.disgenet.org/ · GEMINI_API_KEY=Google Gemini API key for Gemini-based features · HF_TOKEN=HuggingFace token for accessing models and datasets · NCBI_API_KEY=NCBI/PubMed API key for higher rate limits (10 req/sec vs 3 req/sec). Register at https://www.ncbi.nlm.nih.gov/account/ · NVIDIA_API_KEY=NVIDIA NIM API key for AlphaFold2 structure prediction, molecular docking, and genomics tools. Get key at https://build.nvidia.com · OMIM_API_KEY=OMIM API key for Mendelian disease data. Register at https://omim.org/api · ONCOKB_API_TOKEN=OncoKB API token for precision oncology annotations. Register at https://www.oncokb.org/apiAccess · OPENAI_API_KEY=OpenAI API key for LLM-based tool finding and embedding features · OPENROUTER_API_KEY=OpenRouter API key for accessing 100+ LLM models · SEMANTIC_SCHOLAR_API_KEY=Semantic Scholar API key for higher rate limits (100 req/sec vs 1 req/sec). Register at https://www.semanticscholar.org/product/api · UMLS_API_KEY=UMLS API key for medical terminology and concept mapping. Register at https://uts.nlm.nih.gov/uts/ · USPTO_API_KEY=USPTO API key for patent data access. Register at https://developer.uspto.gov/ | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Icon formats (raw) | | MCP-Register | 2026-08-16T01:17:01.420Z | selbstauskunft | | | Connection paths (source structure) | {"packages":[{"registryType":"pypi","identifier":"tooluniverse","version":"1.5.6","runtimeHint":"uvx","transport":"stdio","environment":[{"name":"OPENAI_API_KEY","description":"OpenAI API key for LLM-based tool finding and embedding features","required":false,"secret":true},{"name":"ANTHROPIC_API_KEY","description":"Anthropic API key for Claude-based features","required":false,"secret":true},{"name":"GEMINI_API_KEY","description":"Google Gemini API key for Gemini-based features","required":false,"secret":true},{"name":"OPENROUTER_API_KEY","description":"OpenRouter API key for accessing 100+ LLM models","required":false,"secret":true},{"name":"AZURE_OPENAI_API_KEY","description":"Azure OpenAI API key (alternative to OpenAI)","required":false,"secret":true},{"name":"HF_TOKEN","description":"HuggingFace token for accessing models and datasets","required":false,"secret":true},{"name":"NCBI_API_KEY","description":"NCBI/PubMed API key for higher rate limits (10 req/sec vs 3 req/sec). Register at https://www.ncbi.nlm.nih.gov/account/","required":false,"secret":true},{"name":"SEMANTIC_SCHOLAR_API_KEY","description":"Semantic Scholar API key for higher rate limits (100 req/sec vs 1 req/sec). Register at https://www.semanticscholar.org/product/api","required":false,"secret":true},{"name":"BIOGRID_API_KEY","description":"BioGRID API key for protein-protein interaction queries. Register free at https://webservice.thebiogrid.org/","required":false,"secret":true},{"name":"DISGENET_API_KEY","description":"DisGeNET API key for gene-disease association data. Register free at https://www.disgenet.org/","required":false,"secret":true},{"name":"OMIM_API_KEY","description":"OMIM API key for Mendelian disease data. Register at https://omim.org/api","required":false,"secret":true},{"name":"ONCOKB_API_TOKEN","description":"OncoKB API token for precision oncology annotations. Register at https://www.oncokb.org/apiAccess","required":false,"secret":true},{"name":"NVIDIA_API_KEY","description":"NVIDIA NIM API key for AlphaFold2 structure prediction, molecular docking, and genomics tools. Get key at https://build.nvidia.com","required":false,"secret":true},{"name":"USPTO_API_KEY","description":"USPTO API key for patent data access. Register at https://developer.uspto.gov/","required":false,"secret":true},{"name":"UMLS_API_KEY","description":"UMLS API key for medical terminology and concept mapping. Register at https://uts.nlm.nih.gov/uts/","required":false,"secret":true},{"name":"BRENDA_EMAIL","description":"BRENDA enzyme database login email. Register at https://www.brenda-enzymes.org/","required":false,"secret":false},{"name":"BRENDA_PASSWORD","description":"BRENDA enzyme database login password","required":false,"secret":true}],"additional_arguments_declared":true}],"remotes":[]} | MCP-Register | 2026-10-07T01:17:01.897Z | selbstauskunft | | ## Links - Namespace: [[namensraum/io-github-mims-harvard|io.github.mims-harvard]] --- - Registry page: - Retrieved on: 2026-10-11