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History of phylokit-mcp

io.github.musharna/phylokit-mcp · Registry status: active

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Every published change to this entry, most recent first.

Changes
2026-09-27Declared version: 0.5.1 → 0.6.0
2026-09-27Description (raw): Phylogenetic inference via IQ-TREE 2 — never returns a topology without its support → Phylogenetic inference via IQ-TREE 3 — never returns a topology without its support
2026-09-27Last changed in the registry (raw): 2026-09-23 → 2026-09-26
2026-09-27First listed in the registry (raw): 2026-09-23 → 2026-09-26
2026-09-27Connection paths (source structure): {"packages":[{"registryType":"pypi","identifier":"phylokit-mcp","version":"0.5.1","runtimeHint":"uvx","transport":"stdio","environment":[{"name":"OMP_NUM_THREADS","description":"Pinned so inference is reproducible; overriding it makes IQ-TREE runs non-deterministic.","required":false,"secret":false},{"name":"MKL_NUM_THREADS","description":"Pinned alongside OMP_NUM_THREADS for the same reproducibility reason.","required":false,"secret":false}],"additional_arguments_declared":false}],"remotes":[]} → {"packages":[{"registryType":"pypi","identifier":"phylokit-mcp","version":"0.6.0","runtimeHint":"uvx","transport":"stdio","environment":[{"name":"OMP_NUM_THREADS","description":"Pinned so inference is reproducible; overriding it makes IQ-TREE runs non-deterministic.","required":false,"secret":false},{"name":"MKL_NUM_THREADS","description":"Pinned alongside OMP_NUM_THREADS for the same reproducibility reason.","required":false,"secret":false}],"additional_arguments_declared":false}],"remotes":[]}
2026-09-27Package versions (raw): 0.5.1 → 0.6.0
2026-09-24Declared version: 0.5.0 → 0.5.1
2026-09-24Last changed in the registry (raw): 2026-09-19 → 2026-09-23
2026-09-24First listed in the registry (raw): 2026-09-19 → 2026-09-23
2026-09-24Connection paths (source structure): {"packages":[{"registryType":"pypi","identifier":"phylokit-mcp","version":"0.5.0","runtimeHint":"uvx","transport":"stdio","environment":[{"name":"OMP_NUM_THREADS","description":"Pinned so inference is reproducible; overriding it makes IQ-TREE runs non-deterministic.","required":false,"secret":false},{"name":"MKL_NUM_THREADS","description":"Pinned alongside OMP_NUM_THREADS for the same reproducibility reason.","required":false,"secret":false}],"additional_arguments_declared":false}],"remotes":[]} → {"packages":[{"registryType":"pypi","identifier":"phylokit-mcp","version":"0.5.1","runtimeHint":"uvx","transport":"stdio","environment":[{"name":"OMP_NUM_THREADS","description":"Pinned so inference is reproducible; overriding it makes IQ-TREE runs non-deterministic.","required":false,"secret":false},{"name":"MKL_NUM_THREADS","description":"Pinned alongside OMP_NUM_THREADS for the same reproducibility reason.","required":false,"secret":false}],"additional_arguments_declared":false}],"remotes":[]}
2026-09-24Package versions (raw): 0.5.0 → 0.5.1
2026-09-20Declared version: 0.4.0 → 0.5.0
2026-09-20Last changed in the registry (raw): 2026-08-02 → 2026-09-19
2026-09-20First listed in the registry (raw): 2026-08-02 → 2026-09-19
2026-09-20Connection paths (source structure): {"packages":[{"registryType":"pypi","identifier":"phylokit-mcp","version":"0.4.0","runtimeHint":"uvx","transport":"stdio","environment":[{"name":"OMP_NUM_THREADS","description":"Pinned so inference is reproducible; overriding it makes IQ-TREE runs non-deterministic.","required":false,"secret":false},{"name":"MKL_NUM_THREADS","description":"Pinned alongside OMP_NUM_THREADS for the same reproducibility reason.","required":false,"secret":false}],"additional_arguments_declared":false}],"remotes":[]} → {"packages":[{"registryType":"pypi","identifier":"phylokit-mcp","version":"0.5.0","runtimeHint":"uvx","transport":"stdio","environment":[{"name":"OMP_NUM_THREADS","description":"Pinned so inference is reproducible; overriding it makes IQ-TREE runs non-deterministic.","required":false,"secret":false},{"name":"MKL_NUM_THREADS","description":"Pinned alongside OMP_NUM_THREADS for the same reproducibility reason.","required":false,"secret":false}],"additional_arguments_declared":false}],"remotes":[]}
2026-09-20Package versions (raw): 0.4.0 → 0.5.0
2026-09-08Connection paths (source structure): – → {"packages":[{"registryType":"pypi","identifier":"phylokit-mcp","version":"0.4.0","runtimeHint":"uvx","transport":"stdio","environment":[{"name":"OMP_NUM_THREADS","description":"Pinned so inference is reproducible; overriding it makes IQ-TREE runs non-deterministic.","required":false,"secret":false},{"name":"MKL_NUM_THREADS","description":"Pinned alongside OMP_NUM_THREADS for the same reproducibility reason.","required":false,"secret":false}],"additional_arguments_declared":false}],"remotes":[]}
2026-08-26Description (raw): – → Phylogenetic inference via IQ-TREE 2 — never returns a topology without its support
2026-08-16Last changed in the registry (raw): – → 2026-08-02
2026-08-16First listed in the registry (raw): – → 2026-08-02
2026-08-16Registry status message (raw): – → –
2026-08-16Schema version of the raw record (raw): – → https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json
2026-08-16Icon formats (raw): – → –
2026-08-16Environment variable descriptions (raw): – → MKL_NUM_THREADS=Pinned alongside OMP_NUM_THREADS for the same reproducibility reason. · OMP_NUM_THREADS=Pinned so inference is reproducible; overriding it makes IQ-TREE runs non-deterministic.
2026-08-16Environment variable formats (raw): – → –
2026-08-16Delivery form (raw): – → package
2026-08-16Remote hosts (raw): – → –
2026-08-16Remote URLs (raw): – → –
2026-08-16Runtime hints (raw): – → uvx
2026-08-16Package versions (raw): – → 0.4.0
2026-08-16Package identifiers (raw): – → phylokit-mcp
2026-08-16Repository subfolder (raw): – → –
2026-08-16Repository platform (raw): – → github
2026-08-16Path environment variables (raw): – → –
2026-08-16Required secret headers (raw): – → –
2026-08-06Declared version: – → 0.4.0
2026-08-06Repository URL listed: – → yes
2026-08-06Path argument present: – → no
2026-08-06Execution location: – → local
2026-08-06Required secrets declared: – → no
2026-08-06Package registries (raw): – → pypi
2026-08-06Repository (raw): – → https://github.com/musharna/phylokit-mcp
2026-08-06Path arguments (raw): – → –
2026-08-06Transports (raw): – → stdio
2026-08-06Required secret variables (raw): – → –
2026-08-06Environment variables (raw): – → OMP_NUM_THREADS, MKL_NUM_THREADS

tracevero · https://tracevero.com/mcp/io-github-musharna-phylokit-mcp/aenderungen