Raw values for BioMCP-TS
io.github.yeyuan98/biomcp-ts · Registry status: active
What the source declared verbatim, unchanged and uninterpreted. The derived values on the overview page are computed from these.
Evidence for this page: The values on this page come from several collections. Each row therefore states its own origin.
| Description (raw) | Biomedical MCP server: genes, variants, trials, literature, patents, optional SQL/R/biowasm tools. Source: MCP-Register · collected on 2026-09-01 · self-declared |
|---|---|
| Environment variables (raw) | ANALYSIS_BIOWASM, ANALYSIS_R, DB_TYPE, NCBI_API_KEY, S2_API_KEY, OPENFDA_API_KEY, ONCOKB_TOKEN, DISGENET_API_KEY Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Required secret variables (raw) | confirmed absent Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Transports (raw) | stdio Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Path arguments (raw) | confirmed absent Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Repository (raw) | https://github.com/yeyuan98/biomcp-ts Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Package registries (raw) | npm Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Required secret headers (raw) | confirmed absent Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Path environment variables (raw) | confirmed absent Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Remote URLs (raw) | confirmed absent Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Remote hosts (raw) | confirmed absent Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Registry status message (raw) | confirmed absent Source: MCP-Register · collected on 2026-09-01 · self-declared |
| First listed in the registry (raw) | 2026-09-03 Source: MCP-Register · collected on 2026-09-04 · self-declared |
| Last changed in the registry (raw) | 2026-09-03 Source: MCP-Register · collected on 2026-09-04 · self-declared |
| Schema version of the raw record (raw) | https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Delivery form (raw) | package Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Repository platform (raw) | github Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Repository subfolder (raw) | confirmed absent Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Package identifiers (raw) | biomcp Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Package versions (raw) | 1.1.1 Source: MCP-Register · collected on 2026-09-04 · self-declared |
| Runtime hints (raw) | npx Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Environment variable formats (raw) | confirmed absent Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Environment variable descriptions (raw) | ANALYSIS_BIOWASM=Set to 1 to enable the samtools/bedtools/bcftools biowasm analysis tools · ANALYSIS_R=Set to 1 to enable the R/Bioconductor analysis tools (requires the webr peer dependency; use the pinned one-shot client command) · DB_TYPE=Set to mysql or sqlite to enable the read-only SQL database tools · DISGENET_API_KEY=Required for DisGeNET disease-gene associations · NCBI_API_KEY=Higher NCBI E-utilities rate limits (3 -> 10 req/s) · ONCOKB_TOKEN=Required by the variant_oncokb tool (OncoKB annotations) · OPENFDA_API_KEY=Higher OpenFDA rate limits · S2_API_KEY=Higher Semantic Scholar rate limits Source: MCP-Register · collected on 2026-09-01 · self-declared |
| Icon formats (raw) | confirmed absent Source: MCP-Register · collected on 2026-09-01 · self-declared |
Position within the directory
How many of the 26,983 published entries carry the same measured value. A reference figure, not an assessment.
- Required secrets declaredno22,345 of 26,983 carry this value (83 %)View these entries
- Execution locationlocal12,980 of 26,983 carry this value (48 %)View these entries
- Path argument presentno26,702 of 26,983 carry this value (99 %)View these entries
- Repository URL listedyes20,551 of 26,983 carry this value (76 %)View these entries
- Field of use, derived from the vendor descriptionDatabases252 of 26,983 carry this value (0.9 %)View these entries
All 5 values together are carried by 136 of 26,983 entries.
tracevero · https://tracevero.com/mcp/io-github-yeyuan98-biomcp-ts/rohangaben