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tooluniverse in namespace io.github

Local package path declaredNo credentials listedRepository declared by sourceUpdated 2026-10-06

io.github.mims-harvard/tooluniverse · Registry status: active

No name of its own reaches this register for this entry. The heading therefore carries the trailing segment of the identifier; the identifier itself is listed below as a coordinate.

Report data on this entry

At a glance

2,700+ scientific tools for AI scientists: life science, research, literature, and more.

Vendor's own description, untranslated and unverified

Execution location
Local package path declaredMCP-Register · 2026-08-06
Required secrets declared
No credentials listedMCP-Register · 2026-08-06
Declared version and change
1.5.6 · Source-reported change date 2026-10-06MCP-Register · 2026-10-07
Repository as declared
github.com/mims-harvard/ToolUniverseMCP-Register · 2026-08-06
Configuration
can be built from the disclosed start template

Inspect connection paths and prerequisites

Related categories

6 of 10 categories. All categories in the segment catalogue

Page last changed:

Sources and collection
Runs
Local package path declared
Credentials
No credentials listed
Registry record changed
2026-10-06
Setup
Template available
Registry name
io.github.mims-harvard/tooluniverse
Package coordinate
pypi:tooluniverse
Declared version
1.5.6
Source-reported listing date
2026-10-06
Source-reported change date
2026-10-06
First seen by tracevero
2026-08-06
Vendor's website
https://aiscientist.tools

Evidence for this page: The values on this page come from several collections. Each row therefore states its own origin. What the confidence levels mean

Measured values

Measured values
Required secrets declaredNo credentials listed no
Original data – Required secret variables (raw): confirmed absent
Original data – Required secret headers (raw): confirmed absent
Source: MCP-Register · collected on 2026-08-06 · derived
Execution locationLocal package path declared local
Original data – Transports (raw): stdio
Source: MCP-Register · collected on 2026-08-06 · derived
Path argument presentno
Original data – Path arguments (raw): confirmed absent
Original data – Path environment variables (raw): confirmed absent
Source: MCP-Register · collected on 2026-08-06 · derived
Repository URL listedRepository declared by source yes
Original data – Repository (raw): https://github.com/mims-harvard/ToolUniverse
Source: MCP-Register · collected on 2026-08-06 · derived
Declared version1.5.6
Source: MCP-Register · collected on 2026-10-07 · self-declared

What is measured is what a manifest declares, not what a piece of software does. This registry fetches no repository URL, no endpoint and no package index; nothing here is verified. Which value comes from which source, and by which rule it was formed, is set out in the Methodology.

Source data25

Evidence for this page: The values on this page come from several collections. Each row therefore states its own origin.

Raw values
Description (raw)2,700+ scientific tools for AI scientists: life science, research, literature, and more.
Source: MCP-Register · collected on 2026-10-06 · self-declared
Environment variables (raw)OPENAI_API_KEY, ANTHROPIC_API_KEY, GEMINI_API_KEY, OPENROUTER_API_KEY, AZURE_OPENAI_API_KEY, HF_TOKEN, NCBI_API_KEY, SEMANTIC_SCHOLAR_API_KEY, BIOGRID_API_KEY, DISGENET_API_KEY, OMIM_API_KEY, ONCOKB_API_TOKEN, NVIDIA_API_KEY, USPTO_API_KEY, UMLS_API_KEY, BRENDA_EMAIL, BRENDA_PASSWORD
Source: MCP-Register · collected on 2026-08-06 · self-declared
Required secret variables (raw)confirmed absent
Source: MCP-Register · collected on 2026-08-06 · self-declared
Transports (raw)stdio
Source: MCP-Register · collected on 2026-08-06 · self-declared
Path arguments (raw)confirmed absent
Source: MCP-Register · collected on 2026-08-06 · self-declared
Repository (raw)https://github.com/mims-harvard/ToolUniverse
Source: MCP-Register · collected on 2026-08-06 · self-declared
Package registries (raw)pypi
Source: MCP-Register · collected on 2026-08-06 · self-declared
Required secret headers (raw)confirmed absent
Source: MCP-Register · collected on 2026-08-16 · self-declared
Path environment variables (raw)confirmed absent
Source: MCP-Register · collected on 2026-08-16 · self-declared
Remote URLs (raw)confirmed absent
Source: MCP-Register · collected on 2026-08-16 · self-declared
Remote hosts (raw)confirmed absent
Source: MCP-Register · collected on 2026-08-16 · self-declared
Registry status message (raw)confirmed absent
Source: MCP-Register · collected on 2026-08-16 · self-declared
First listed in the registry (raw)2026-10-06
Source: MCP-Register · collected on 2026-10-07 · self-declared
Last changed in the registry (raw)2026-10-06
Source: MCP-Register · collected on 2026-10-07 · self-declared
Schema version of the raw record (raw)https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json
Source: MCP-Register · collected on 2026-08-16 · self-declared
Delivery form (raw)package
Source: MCP-Register · collected on 2026-08-16 · self-declared
Repository platform (raw)github
Source: MCP-Register · collected on 2026-08-16 · self-declared
Repository subfolder (raw)confirmed absent
Source: MCP-Register · collected on 2026-08-16 · self-declared
Package identifiers (raw)tooluniverse
Source: MCP-Register · collected on 2026-08-16 · self-declared
Package versions (raw)1.5.6
Source: MCP-Register · collected on 2026-10-07 · self-declared
Runtime hints (raw)uvx
Source: MCP-Register · collected on 2026-08-16 · self-declared
Environment variable formats (raw)confirmed absent
Source: MCP-Register · collected on 2026-08-16 · self-declared
Environment variable descriptions (raw)ANTHROPIC_API_KEY=Anthropic API key for Claude-based features · AZURE_OPENAI_API_KEY=Azure OpenAI API key (alternative to OpenAI) · BIOGRID_API_KEY=BioGRID API key for protein-protein interaction queries. Register free at https://webservice.thebiogrid.org/ · BRENDA_EMAIL=BRENDA enzyme database login email. Register at https://www.brenda-enzymes.org/ · BRENDA_PASSWORD=BRENDA enzyme database login password · DISGENET_API_KEY=DisGeNET API key for gene-disease association data. Register free at https://www.disgenet.org/ · GEMINI_API_KEY=Google Gemini API key for Gemini-based features · HF_TOKEN=HuggingFace token for accessing models and datasets · NCBI_API_KEY=NCBI/PubMed API key for higher rate limits (10 req/sec vs 3 req/sec). Register at https://www.ncbi.nlm.nih.gov/account/ · NVIDIA_API_KEY=NVIDIA NIM API key for AlphaFold2 structure prediction, molecular docking, and genomics tools. Get key at https://build.nvidia.com · OMIM_API_KEY=OMIM API key for Mendelian disease data. Register at https://omim.org/api · ONCOKB_API_TOKEN=OncoKB API token for precision oncology annotations. Register at https://www.oncokb.org/apiAccess · OPENAI_API_KEY=OpenAI API key for LLM-based tool finding and embedding features · OPENROUTER_API_KEY=OpenRouter API key for accessing 100+ LLM models · SEMANTIC_SCHOLAR_API_KEY=Semantic Scholar API key for higher rate limits (100 req/sec vs 1 req/sec). Register at https://www.semanticscholar.org/product/api · UMLS_API_KEY=UMLS API key for medical terminology and concept mapping. Register at https://uts.nlm.nih.gov/uts/ · USPTO_API_KEY=USPTO API key for patent data access. Register at https://developer.uspto.gov/
Source: MCP-Register · collected on 2026-08-16 · self-declared
Icon formats (raw)confirmed absent
Source: MCP-Register · collected on 2026-08-16 · self-declared
Connection paths (source structure){"packages":[{"registryType":"pypi","identifier":"tooluniverse","version":"1.5.6","runtimeHint":"uvx","transport":"stdio","environment":[{"name":"OPENAI_API_KEY","description":"OpenAI API key for LLM-based tool finding and embedding features","required":false,"secret":true},{"name":"ANTHROPIC_API_KEY","description":"Anthropic API key for Claude-based features","required":false,"secret":true},{"name":"GEMINI_API_KEY","description":"Google Gemini API key for Gemini-based features","required":false,"secret":true},{"name":"OPENROUTER_API_KEY","description":"OpenRouter API key for accessing 100+ LLM models","required":false,"secret":true},{"name":"AZURE_OPENAI_API_KEY","description":"Azure OpenAI API key (alternative to OpenAI)","required":false,"secret":true},{"name":"HF_TOKEN","description":"HuggingFace token for accessing models and datasets","required":false,"secret":true},{"name":"NCBI_API_KEY","description":"NCBI/PubMed API key for higher rate limits (10 req/sec vs 3 req/sec). Register at https://www.ncbi.nlm.nih.gov/account/","required":false,"secret":true},{"name":"SEMANTIC_SCHOLAR_API_KEY","description":"Semantic Scholar API key for higher rate limits (100 req/sec vs 1 req/sec). Register at https://www.semanticscholar.org/product/api","required":false,"secret":true},{"name":"BIOGRID_API_KEY","description":"BioGRID API key for protein-protein interaction queries. Register free at https://webservice.thebiogrid.org/","required":false,"secret":true},{"name":"DISGENET_API_KEY","description":"DisGeNET API key for gene-disease association data. Register free at https://www.disgenet.org/","required":false,"secret":true},{"name":"OMIM_API_KEY","description":"OMIM API key for Mendelian disease data. Register at https://omim.org/api","required":false,"secret":true},{"name":"ONCOKB_API_TOKEN","description":"OncoKB API token for precision oncology annotations. Register at https://www.oncokb.org/apiAccess","required":false,"secret":true},{"name":"NVIDIA_API_KEY","description":"NVIDIA NIM API key for AlphaFold2 structure prediction, molecular docking, and genomics tools. Get key at https://build.nvidia.com","required":false,"secret":true},{"name":"USPTO_API_KEY","description":"USPTO API key for patent data access. Register at https://developer.uspto.gov/","required":false,"secret":true},{"name":"UMLS_API_KEY","description":"UMLS API key for medical terminology and concept mapping. Register at https://uts.nlm.nih.gov/uts/","required":false,"secret":true},{"name":"BRENDA_EMAIL","description":"BRENDA enzyme database login email. Register at https://www.brenda-enzymes.org/","required":false,"secret":false},{"name":"BRENDA_PASSWORD","description":"BRENDA enzyme database login password","required":false,"secret":true}],"additional_arguments_declared":true}],"remotes":[]}
Source: MCP-Register · collected on 2026-10-07 · self-declared
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Changes

Changes
2026-10-07Declared version: 1.5.5 → 1.5.6
2026-10-07Last changed in the registry (raw): 2026-10-05 → 2026-10-06
2026-10-07First listed in the registry (raw): 2026-10-05 → 2026-10-06

These are the 3 most recent changes to this entry. Full history

tracevero · https://tracevero.com/mcp/io-github-mims-harvard-tooluniverse