Raw values for tooluniverse in namespace io.github
io.github.mims-harvard/tooluniverse · Registry status: active
No name of its own reaches this register for this entry. The heading therefore carries the trailing segment of the identifier; the identifier itself is listed below as a coordinate.
What the source declared verbatim, unchanged and uninterpreted. The derived values on the overview page are computed from these.
Evidence for this page: The values on this page come from several collections. Each row therefore states its own origin.
| Description (raw) | 2,700+ scientific tools for AI scientists: life science, research, literature, and more. Source: MCP-Register · collected on 2026-10-06 · self-declared |
|---|---|
| Environment variables (raw) | OPENAI_API_KEY, ANTHROPIC_API_KEY, GEMINI_API_KEY, OPENROUTER_API_KEY, AZURE_OPENAI_API_KEY, HF_TOKEN, NCBI_API_KEY, SEMANTIC_SCHOLAR_API_KEY, BIOGRID_API_KEY, DISGENET_API_KEY, OMIM_API_KEY, ONCOKB_API_TOKEN, NVIDIA_API_KEY, USPTO_API_KEY, UMLS_API_KEY, BRENDA_EMAIL, BRENDA_PASSWORD Source: MCP-Register · collected on 2026-08-06 · self-declared |
| Required secret variables (raw) | confirmed absent Source: MCP-Register · collected on 2026-08-06 · self-declared |
| Transports (raw) | stdio Source: MCP-Register · collected on 2026-08-06 · self-declared |
| Path arguments (raw) | confirmed absent Source: MCP-Register · collected on 2026-08-06 · self-declared |
| Repository (raw) | https://github.com/mims-harvard/ToolUniverse Source: MCP-Register · collected on 2026-08-06 · self-declared |
| Package registries (raw) | pypi Source: MCP-Register · collected on 2026-08-06 · self-declared |
| Required secret headers (raw) | confirmed absent Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Path environment variables (raw) | confirmed absent Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Remote URLs (raw) | confirmed absent Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Remote hosts (raw) | confirmed absent Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Registry status message (raw) | confirmed absent Source: MCP-Register · collected on 2026-08-16 · self-declared |
| First listed in the registry (raw) | 2026-10-06 Source: MCP-Register · collected on 2026-10-07 · self-declared |
| Last changed in the registry (raw) | 2026-10-06 Source: MCP-Register · collected on 2026-10-07 · self-declared |
| Schema version of the raw record (raw) | https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Delivery form (raw) | package Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Repository platform (raw) | github Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Repository subfolder (raw) | confirmed absent Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Package identifiers (raw) | tooluniverse Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Package versions (raw) | 1.5.6 Source: MCP-Register · collected on 2026-10-07 · self-declared |
| Runtime hints (raw) | uvx Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Environment variable formats (raw) | confirmed absent Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Environment variable descriptions (raw) | ANTHROPIC_API_KEY=Anthropic API key for Claude-based features · AZURE_OPENAI_API_KEY=Azure OpenAI API key (alternative to OpenAI) · BIOGRID_API_KEY=BioGRID API key for protein-protein interaction queries. Register free at https://webservice.thebiogrid.org/ · BRENDA_EMAIL=BRENDA enzyme database login email. Register at https://www.brenda-enzymes.org/ · BRENDA_PASSWORD=BRENDA enzyme database login password · DISGENET_API_KEY=DisGeNET API key for gene-disease association data. Register free at https://www.disgenet.org/ · GEMINI_API_KEY=Google Gemini API key for Gemini-based features · HF_TOKEN=HuggingFace token for accessing models and datasets · NCBI_API_KEY=NCBI/PubMed API key for higher rate limits (10 req/sec vs 3 req/sec). Register at https://www.ncbi.nlm.nih.gov/account/ · NVIDIA_API_KEY=NVIDIA NIM API key for AlphaFold2 structure prediction, molecular docking, and genomics tools. Get key at https://build.nvidia.com · OMIM_API_KEY=OMIM API key for Mendelian disease data. Register at https://omim.org/api · ONCOKB_API_TOKEN=OncoKB API token for precision oncology annotations. Register at https://www.oncokb.org/apiAccess · OPENAI_API_KEY=OpenAI API key for LLM-based tool finding and embedding features · OPENROUTER_API_KEY=OpenRouter API key for accessing 100+ LLM models · SEMANTIC_SCHOLAR_API_KEY=Semantic Scholar API key for higher rate limits (100 req/sec vs 1 req/sec). Register at https://www.semanticscholar.org/product/api · UMLS_API_KEY=UMLS API key for medical terminology and concept mapping. Register at https://uts.nlm.nih.gov/uts/ · USPTO_API_KEY=USPTO API key for patent data access. Register at https://developer.uspto.gov/ Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Icon formats (raw) | confirmed absent Source: MCP-Register · collected on 2026-08-16 · self-declared |
| Connection paths (source structure) | {"packages":[{"registryType":"pypi","identifier":"tooluniverse","version":"1.5.6","runtimeHint":"uvx","transport":"stdio","environment":[{"name":"OPENAI_API_KEY","description":"OpenAI API key for LLM-based tool finding and embedding features","required":false,"secret":true},{"name":"ANTHROPIC_API_KEY","description":"Anthropic API key for Claude-based features","required":false,"secret":true},{"name":"GEMINI_API_KEY","description":"Google Gemini API key for Gemini-based features","required":false,"secret":true},{"name":"OPENROUTER_API_KEY","description":"OpenRouter API key for accessing 100+ LLM models","required":false,"secret":true},{"name":"AZURE_OPENAI_API_KEY","description":"Azure OpenAI API key (alternative to OpenAI)","required":false,"secret":true},{"name":"HF_TOKEN","description":"HuggingFace token for accessing models and datasets","required":false,"secret":true},{"name":"NCBI_API_KEY","description":"NCBI/PubMed API key for higher rate limits (10 req/sec vs 3 req/sec). Register at https://www.ncbi.nlm.nih.gov/account/","required":false,"secret":true},{"name":"SEMANTIC_SCHOLAR_API_KEY","description":"Semantic Scholar API key for higher rate limits (100 req/sec vs 1 req/sec). Register at https://www.semanticscholar.org/product/api","required":false,"secret":true},{"name":"BIOGRID_API_KEY","description":"BioGRID API key for protein-protein interaction queries. Register free at https://webservice.thebiogrid.org/","required":false,"secret":true},{"name":"DISGENET_API_KEY","description":"DisGeNET API key for gene-disease association data. Register free at https://www.disgenet.org/","required":false,"secret":true},{"name":"OMIM_API_KEY","description":"OMIM API key for Mendelian disease data. Register at https://omim.org/api","required":false,"secret":true},{"name":"ONCOKB_API_TOKEN","description":"OncoKB API token for precision oncology annotations. Register at https://www.oncokb.org/apiAccess","required":false,"secret":true},{"name":"NVIDIA_API_KEY","description":"NVIDIA NIM API key for AlphaFold2 structure prediction, molecular docking, and genomics tools. Get key at https://build.nvidia.com","required":false,"secret":true},{"name":"USPTO_API_KEY","description":"USPTO API key for patent data access. Register at https://developer.uspto.gov/","required":false,"secret":true},{"name":"UMLS_API_KEY","description":"UMLS API key for medical terminology and concept mapping. Register at https://uts.nlm.nih.gov/uts/","required":false,"secret":true},{"name":"BRENDA_EMAIL","description":"BRENDA enzyme database login email. Register at https://www.brenda-enzymes.org/","required":false,"secret":false},{"name":"BRENDA_PASSWORD","description":"BRENDA enzyme database login password","required":false,"secret":true}],"additional_arguments_declared":true}],"remotes":[]} Source: MCP-Register · collected on 2026-10-07 · self-declared |
Position within the directory
How many of the 41,867 published entries carry the same measured value. A reference figure, not an assessment.
- Required secrets declaredno35,800 of 41,867 carry this value (86 %)View these entries
- Execution locationlocal17,056 of 41,867 carry this value (41 %)View these entries
- Path argument presentno41,369 of 41,867 carry this value (99 %)View these entries
- Repository URL listedyes30,107 of 41,867 carry this value (72 %)View these entries
All 4 values together are carried by 12,140 of 41,867 entries.
tracevero · https://tracevero.com/mcp/io-github-mims-harvard-tooluniverse/rohangaben